Zhang J†, Chen L†, Xing F, Kudrna A, Yao W, Copetti D, Mu T , Li W, Song JM, Xie W , Lee S, Talag J, Shao L, An Y, Zhang CL, Ouyang Y, Sun S, Jiao WB, Lv F, Du B, Luo M, Maldonado CE, Goicoechea JL, Xiong L, Wu C, Xing Y, Zhou DX, Yu S, Zhao Y, Wang G, Yu Y, Luo Y, Zhou ZW, Hurtado BEP, Danowitz A, Wing R*, Zhang Q* (2016) Data Descriptor: Building two indica rice reference genomes with PacBio long-read and Illumina paired-end sequencing data. Sci Data 3:160076.